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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6886513 chr5:49841558 T/C LOC647121 chr1:121260910-121313686:+ -0.37 -7.63 1.3E-13 Box Plot
THCA rs6889220 chr5:176693888 G/A LOC388955 chr2:63849182-63850159:- 0.92 24.36 8.19E-86 Box Plot
THCA rs6890580 chr5:176653520 G/A LOC388955 chr2:63849182-63850159:- -0.69 -17.86 4.94E-55 Box Plot
THCA rs6892290 chr5:45427137 A/G LOC647121 chr1:121260910-121313686:+ 0.36 7.55 2.24E-13 Box Plot
THCA rs6892594 chr5:45427173 C/T LOC647121 chr1:121260910-121313686:+ 0.35 7.42 5.58E-13 Box Plot
THCA rs6892627 chr5:45722994 A/C LOC647121 chr1:121260910-121313686:+ 0.37 7.94 1.41E-14 Box Plot
THCA rs6893242 chr5:170810098 T/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.28E-9 Box Plot
THCA rs6893549 chr5:90057977 A/G DHRS7 chr14:60610838-60636574:- -0.46 -6.32 6.12E-10 Box Plot
THCA rs6893773 chr5:45622496 C/A LOC647121 chr1:121260910-121313686:+ 0.38 8.03 7.72E-15 Box Plot
THCA rs6894486 chr5:171702889 C/T MAT2B chr5:162930120-162946342:+ 0.26 6.04 3.06E-9 Box Plot
THCA rs6895191 chr5:45877674 T/G LOC647121 chr1:121260910-121313686:+ 0.36 7.72 6.88E-14 Box Plot
THCA rs6898026 chr5:49783841 G/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.92 1.67E-14 Box Plot
THCA rs6898102 chr5:49874330 A/G LOC647121 chr1:121260910-121313686:+ -0.34 -6.98 9.77E-12 Box Plot
THCA rs6898107 chr5:176679695 A/G LOC388955 chr2:63849182-63850159:- 0.85 22.53 3.88E-77 Box Plot
THCA rs6898824 chr5:45842160 C/T LOC647121 chr1:121260910-121313686:+ -0.38 -7.99 9.95E-15 Box Plot